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The San Francisco Seals were a minor league baseball team in San Francisco, California, that played in the Pacific Coast League from 1903 until 1957 before transferring to Phoenix, Arizona. The organization was named for the abundant California sea lion and harbor seal populations in the Bay Area. The 1909, 1922, 1925, and 1928 Seals were recognized as being among the 100 greatest minor league teams of all time.

The Bisbee Bees were a Minor League Baseball team that represented Bisbee, Arizona from 1928 to 1941. The Bisbee Bees played as members of the Arizona State League (1928–1930) and Arizona–Texas League (1931–1932, 1937–1941). The Bees were an affiliate of the Chicago Cubs in 1930, Cincinnati Reds in 1937 and Chicago Cubs from 1939 to 1941.

Joliet first hosted minor league baseball in 1890. The Joliet Convicts became members of the Independent level Illinois-Iowa League. In their first season of play, the Joliet Convicts placed 6th with a record of 56–59 in the eight–team Illinois-Iowa League. W.E. Buckley and Ed Culberson served as the Joliet managers as the Convicts finished 14.0 games behind the 1st place Ottumwa Coal Palace Kings in the final standings. The Joliet use of the "Convicts" moniker was in reference to local industry, with Joliet, Illinois being home to the Joliet Correctional Center beginning in 1858.

The Muncie Fruit Jars were a professional minor league baseball team based in Muncie, Indiana. The club was first formed in 1906 as a team in the class-C Interstate Association. The Fruit Jars' name was inspired by Muncie's local economy, which was the home of Ball Brothers Glass Manufacturing Company, famous for producing glass canning jars. The team was expelled from the league on May 18, 1906, after posting a 4-12 record. Less than two months later, the league folded on July 8, 1906. The team was fielded again in 1908 as a member of the class-D Indiana-Ohio League. The league began play on May 9, however it was forced to fold on June 8, 1908.

In 1892, minor league baseball began, as the Jacksonville Lunatics joined the eight–team 1892 Illinois–Iowa League. The Lunatics finished with a 30–57 record to place 4th in the league standings as four of the league members folded during the season. Only Jacksonville, the Joliet Convicts, Rockford Hustlers and Rock Island-Moline Twins competed the season and Jacksonville finished 27.0 games behind 1st place Joilet. The Illinois–Iowa League folded after the season. With the Kentucky–Illinois–Tennessee League folded, the Jacksonville Lunatics joined the eight–team 1907 Iowa State League. The Lunatics placed 4th in the standings with a 63–61 record, ending the season 16.0 games behind the 1st place Waterloo Cubs.

The Oakland Oaks were a minor league baseball team in Oakland, California that played in the Pacific Coast League from 1903 through 1955, after which the club transferred to Vancouver, British Columbia. The team was named for the city and used the oak tree and the acorn as its symbols.

One team, from Springfield, Illinois played in the Central League from 1912-1917. Another team, from Springfield, Ohio played in the Ohio State League in 1908 and 1911. The Springfield Reapers/Portsmouth Cobblers, a minor league baseball team, played in the Central League and Ohio State League between 1908 and 1917.

The Las Vegas Wranglers were a minor league baseball team that played in various leagues in the 1940s and 1950s. They were Las Vegas's first professional team in any sport.

Allentown Peanuts refers to two baseball teams: one that played in the Central League in 1888, and another that played in the Atlantic League from 1898 to 1900. They were based in Allentown, Pennsylvania and had no big league affiliations. In 1898, they went 55-67 under managers James McGeehan and Billy Sharsig, and in 1899 they went 37-47 under manager Sharsig.

The Lizards faced off against the Albuquerque Dons at Municipal Park on July 23, 1932. Although the final score was 9-6, the game did go 13 innings with “excellent defensive play by the Tucsonans.” “Fine fielding by Joe Silva and Vincent DeMaggio” made them standouts in the losing Lizard cause. The Lizards and Dons were members of the Arizona-Texas League. But trouble was looming at the league’s door. A short item, following the game story, said the Dons were in financial trouble. Team members had not been paid since June 1st.

The Shenandoah Huns were a minor league baseball club, based in Shenandoah, Pennsylvania in 1894 and 1895. The team was formed when the Scranton Miners jumped from the Pennsylvania State League to the Eastern League on July 26, 1894. A week later the Huns were formed to replace Scranton in the league on August 2. The team continued to play in the Pennsylvania State League the following year, but disbanded during the season on May 20, 1895. Prior to the Huns, Shenandoah fielded the Shenandoah Hungarian Rioters a minor league team that played from 1888 to 1889 in the Middle States League and the Central League.

The Davenport Blue Sox was the name given to three minor league baseball teams based in Davenport, Iowa. The first version of the Blue Sox played in the Class B Three-I League from 1913–1916. The second played in the Class D Mississippi Valley League from 1929–1933, and the third version played in the Western League from 1934–1937. From 1936–1937, the team was a minor league affiliate of the Brooklyn Dodgers. The Blue Sox played their home games at Municipal Stadium from 1931–1937 and were the foundation for today's tenant, the Quad Cities River Bandits.

Hannibal teams played under a variety of monikers throughout their history. The first Hannibal minor league team was known as the Hannibal Cannibals, beginning play in the 1908 Illinois–Missouri League and continuing in the Central Association from 1909 to 1912. Baseball Hall of Fame member Jake Beckley played and managed for the 1911 Hannibal Cannibals. On August 25, 1911, Roy Brown of the Hannibal Cannibals pitched a no-hitter against the Monmouth Browns as Hannibal won the game 3–0.

The Kalamazoo Kazoos, a minor league baseball team, played in the Michigan State League, Michigan-Ontario League, Ohio State League, Southern Michigan Association, Southern Michigan League and Tri-State League between 1887 and 1924.

The Fort Pierce Bombers were a professional minor league baseball team based in Fort Pierce, Florida from 1940 until 1942. The clubs played in the Class-D Florida East Coast League. The league and the team both shut their doors, along with many other minor leagues, a few months after the United States entered World War II, and, despite the postwar baseball boom, they were not revived.

The Salem Witches were a baseball team of the New England League, a minor league in American major league baseball. The team played a total of five non-consecutive seasons using the "Witches" moniker. Salem also hosted the New England League Salem Fairies (1887) and Salem (1891–1892), as well as Salem of the New England Association (1895). Salem first had a team in the 1884 Massachusetts State Association

Columbia's former minor league baseball team

The Walla Walla Bears were a minor league baseball team in the northwest United States, located in Walla Walla, Washington. The Bears were members of the Class A short-season Northwest League and were affiliated with the Philadelphia Phillies.

The Sacramento Solons were a minor league baseball team based in Sacramento, California. They played in the Pacific Coast League during several periods (1903, 1905, 1909–1914, 1918–1960, 1974–1976). The current Sacramento River Cats began play in 2000.

The Portland Beavers was the name of separate minor league baseball teams, which represented Portland, Oregon, in the Pacific Coast League (PCL). The team was established in 1903, the first year of the PCL.

The Clear Lake Fish Eaters were a minor league baseball team based in Clear Lake, Iowa. Clear Lake teams played as members of the Independent level Iowa State League in 1912 and the Class D level Central Association in 1917, with the 1917 team playing a brief season as the "Rabbits.". Both teams hosted home minor league games at the Clear Lake City Ball Park.

The Portland Beavers was the name of separate minor league baseball teams, which represented Portland, Oregon, in the Pacific Coast League (PCL). The team was established in 1903, the first year of the PCL, until the last iteration ended playing in 2010.

The La Grande Babes were a minor league baseball team based in La Grande, Oregon in 1908, as Le Grande teams played between 1891 and 1913 with different monikers each season. La Grande teams played as members of the Pacific Interstate League in 1891, Inland Empire League in 1902 and 1908 and Western Tri-State League in 1912 to 1913. The La Grande Rhonders won the 1891 Pacific Interstate League and the La Grande Babes won the 1908 Inland Empire League Championships.

The Miami Miners were a Minor League Baseball team that represented Miami, Arizona in the Arizona State League from 1928 to 1930. The Globe-Miami Browns would succeed them in 1947.

A number of different minor league baseball teams have played in San Francisco, California from 1878 through the arrival of the Major League San Francisco Giants in 1958. The most notable team was the San Francisco Seals of the Pacific Coast League but prior to their formation in 1903 a number of teams operated primarily in the California League and its various predecessors and offshoots, including multiple teams in the same league at various times.

In 1886, Boston fielded another minor league team, as the Boston Blues became members of the New England League. The Blues finished the 1886 season with a record of 35–63, placing 6th and last in the New England League under managers Walter Burnham and Tim Murnane. The Boston Blues finished in the New England League standings with Brockton (45–56), Haverhill (59–38), Lawrence (42–55), Newburyport Clamdiggers/Lynn (53–52) and Portland (66–36). The Blues their played home games at South End Grounds.

The Minneapolis Millers were an American professional minor league baseball team that played in Minneapolis, Minnesota, through 1960. In the 19th century a different Minneapolis Millers were part of the Western League. The team played first in Athletic Park and later Nicollet Park.

The Brownsville Charros were a minor league baseball team, based in Brownsville, Texas. The team played as the Brownsville Brownies from 1910-1911 in the Southwest Texas League before shutting down. They were revived in 1928 and then became the Charros in 1938 in the Texas Valley League. The team returned again in 1939 as part of the Rio Grande Valley League and moved to the Gulf Coast League in 1951. A new team by the same name began in 2014 as part of the United League Baseball. The team finished its season on August 15, 2014 with its last game on the road against the Fort Worth Cats. The team was managed by former Major League Baseball player Ozzie Canseco.

The Tucson Toros were a professional baseball team based in Tucson, Arizona, in the United States. The original Toros were a Triple-A minor league baseball team in the Pacific Coast League from 1969 to 1997, where they won the PCL Championship in 1991 and 1993. They were affiliated with several Major League Baseball teams over the years, most notably with the Houston Astros. A later team named the Toros played in the independent Golden Baseball League.

The Gary Sand Fleas were a minor league baseball team based in Gary, Indiana. In 1910, the Gary Sand Fleas were charter members of the Class D level Indiana-Michigan League and folded during the league's only season of play. Gary hosted home minor league games at Knerfs Park.

The Sheboygan Indians operated from 1940–1942 and 1946–1953 as members of the Class D Wisconsin State League. The Indians were preceded by the Sheboygan Chairmakers, who played in the Independent Wisconsin State League from 1923–1932 and 1934–1937. Joe Hauser was the manager of the Indians for their duration. Hauser, incidentally, had been a major-league first baseman in the 1920s primarily with the Philadelphia Athletics. In 1924, he hit 27 home runs to finish second in the American League to Babe Ruth. Hauser began his career with the Sheboygan Indians as a player/manager and then a full-time manager.

The Mission Grapefruiters were a minor league baseball team based in Mission, Texas. The Grapefruiters played as members of the Class D level Gulf Coast League in 1926 and Texas Valley League from 1927 to 1928, winning the 1927 league pennant.

The Cedar Rapids Rabbits, an independent, minor league baseball team, played in the Central Association, Eastern Iowa League and Illinois-Iowa-Indiana League between 1895 and 1921.

Idaho Falls has hosted a number of minor league teams in the Pioneer League since 1940. From 1986 to 1991 and then again from 1993 to 1999 the team was affiliated with and named after the Atlanta Braves. The team is now called the Idaho Falls Chukars and is independent.

The Riverside Rubes/Dons were a minor league baseball team, based in Riverside, California that played in the Sunset League from 1947 to 1950.

The Hagerstown Owls were a Minor League Baseball team based in Hagerstown, Maryland, United States. The team played in the Inter-State League (1941–1952) and the Piedmont League (1953–1955). Their home games were played in Municipal Stadium.